Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| AMA43518.1 | AMA43522.1 | AWJ11_14885 | AWJ11_14910 | Phosphoglucomutase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Alpha/beta hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.445 |
| AMA43518.1 | rpmB | AWJ11_14885 | AWJ11_14900 | Phosphoglucomutase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 50S ribosomal protein L28; Required for 70S ribosome assembly; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial ribosomal protein bL28 family. | 0.533 |
| AMA43518.1 | rpmG | AWJ11_14885 | AWJ11_14905 | Phosphoglucomutase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 50S ribosomal protein L33; In Escherichia coli BM108, a mutation that results in lack of L33 synthesis had no effect on ribosome synthesis or function; there are paralogous genes in several bacterial genomes, and a CXXC motif for zinc binding and an upstream regulation region of the paralog lacking this motif that are regulated by zinc similar to other ribosomal proteins like L31; the proteins in this group lack the CXXC motif; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.522 |
| AMA43522.1 | AMA43518.1 | AWJ11_14910 | AWJ11_14885 | Alpha/beta hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Phosphoglucomutase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.445 |
| AMA43522.1 | AMA43523.1 | AWJ11_14910 | AWJ11_14915 | Alpha/beta hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. | MATE family efflux transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.513 |
| AMA43522.1 | AMA43549.1 | AWJ11_14910 | AWJ11_15095 | Alpha/beta hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Isochorismatase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.444 |
| AMA43522.1 | rpmB | AWJ11_14910 | AWJ11_14900 | Alpha/beta hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 50S ribosomal protein L28; Required for 70S ribosome assembly; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial ribosomal protein bL28 family. | 0.532 |
| AMA43522.1 | rpmG | AWJ11_14910 | AWJ11_14905 | Alpha/beta hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 50S ribosomal protein L33; In Escherichia coli BM108, a mutation that results in lack of L33 synthesis had no effect on ribosome synthesis or function; there are paralogous genes in several bacterial genomes, and a CXXC motif for zinc binding and an upstream regulation region of the paralog lacking this motif that are regulated by zinc similar to other ribosomal proteins like L31; the proteins in this group lack the CXXC motif; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.553 |
| AMA43523.1 | AMA43522.1 | AWJ11_14915 | AWJ11_14910 | MATE family efflux transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. | Alpha/beta hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.513 |
| AMA43523.1 | rpmG | AWJ11_14915 | AWJ11_14905 | MATE family efflux transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. | 50S ribosomal protein L33; In Escherichia coli BM108, a mutation that results in lack of L33 synthesis had no effect on ribosome synthesis or function; there are paralogous genes in several bacterial genomes, and a CXXC motif for zinc binding and an upstream regulation region of the paralog lacking this motif that are regulated by zinc similar to other ribosomal proteins like L31; the proteins in this group lack the CXXC motif; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.451 |
| AMA43549.1 | AMA43522.1 | AWJ11_15095 | AWJ11_14910 | Isochorismatase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Alpha/beta hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.444 |
| rpmB | AMA43518.1 | AWJ11_14900 | AWJ11_14885 | 50S ribosomal protein L28; Required for 70S ribosome assembly; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial ribosomal protein bL28 family. | Phosphoglucomutase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.533 |
| rpmB | AMA43522.1 | AWJ11_14900 | AWJ11_14910 | 50S ribosomal protein L28; Required for 70S ribosome assembly; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial ribosomal protein bL28 family. | Alpha/beta hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.532 |
| rpmB | rpmG | AWJ11_14900 | AWJ11_14905 | 50S ribosomal protein L28; Required for 70S ribosome assembly; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial ribosomal protein bL28 family. | 50S ribosomal protein L33; In Escherichia coli BM108, a mutation that results in lack of L33 synthesis had no effect on ribosome synthesis or function; there are paralogous genes in several bacterial genomes, and a CXXC motif for zinc binding and an upstream regulation region of the paralog lacking this motif that are regulated by zinc similar to other ribosomal proteins like L31; the proteins in this group lack the CXXC motif; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.998 |
| rpmG | AMA43518.1 | AWJ11_14905 | AWJ11_14885 | 50S ribosomal protein L33; In Escherichia coli BM108, a mutation that results in lack of L33 synthesis had no effect on ribosome synthesis or function; there are paralogous genes in several bacterial genomes, and a CXXC motif for zinc binding and an upstream regulation region of the paralog lacking this motif that are regulated by zinc similar to other ribosomal proteins like L31; the proteins in this group lack the CXXC motif; Derived by automated computational analysis using gene prediction method: Protein Homology. | Phosphoglucomutase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.522 |
| rpmG | AMA43522.1 | AWJ11_14905 | AWJ11_14910 | 50S ribosomal protein L33; In Escherichia coli BM108, a mutation that results in lack of L33 synthesis had no effect on ribosome synthesis or function; there are paralogous genes in several bacterial genomes, and a CXXC motif for zinc binding and an upstream regulation region of the paralog lacking this motif that are regulated by zinc similar to other ribosomal proteins like L31; the proteins in this group lack the CXXC motif; Derived by automated computational analysis using gene prediction method: Protein Homology. | Alpha/beta hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.553 |
| rpmG | AMA43523.1 | AWJ11_14905 | AWJ11_14915 | 50S ribosomal protein L33; In Escherichia coli BM108, a mutation that results in lack of L33 synthesis had no effect on ribosome synthesis or function; there are paralogous genes in several bacterial genomes, and a CXXC motif for zinc binding and an upstream regulation region of the paralog lacking this motif that are regulated by zinc similar to other ribosomal proteins like L31; the proteins in this group lack the CXXC motif; Derived by automated computational analysis using gene prediction method: Protein Homology. | MATE family efflux transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.451 |
| rpmG | rpmB | AWJ11_14905 | AWJ11_14900 | 50S ribosomal protein L33; In Escherichia coli BM108, a mutation that results in lack of L33 synthesis had no effect on ribosome synthesis or function; there are paralogous genes in several bacterial genomes, and a CXXC motif for zinc binding and an upstream regulation region of the paralog lacking this motif that are regulated by zinc similar to other ribosomal proteins like L31; the proteins in this group lack the CXXC motif; Derived by automated computational analysis using gene prediction method: Protein Homology. | 50S ribosomal protein L28; Required for 70S ribosome assembly; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial ribosomal protein bL28 family. | 0.998 |