STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C882_0109Threonine dehydrogenase. (406 aa)    
Predicted Functional Partners:
C882_0108
Short-chain dehydrogenase/reductase SDR; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
 
 
 0.920
C882_0110
Cyclase/dehydrase.
 
    0.890
C882_0269
Malonyl CoA-acyl carrier protein transacylase.
  
 
 0.879
C882_1056
S-formylglutathione hydrolase; Serine hydrolase involved in the detoxification of formaldehyde.
 
 0.833
C882_1055
S-(hydroxymethyl)glutathione dehydrogenase; Belongs to the zinc-containing alcohol dehydrogenase family. Class-III subfamily.
  
 
0.802
C882_0782
Short-chain dehydrogenase family protein.
 
 
 0.772
guaA
GMP synthase; Catalyzes the synthesis of GMP from XMP.
    
  0.757
C882_0270
Malonyl CoA-acyl carrier protein transacylase.
    
 0.733
C882_2271
Putative cytochrome P450 hydroxylase.
  
 
 0.729
C882_1962
Sarcosine oxidase alpha subunit; Belongs to the GcvT family.
  
 
 0.728
Your Current Organism:
Caenispirillum salinarum
NCBI taxonomy Id: 1238182
Other names: C. salinarum AK4, Caenispirillum salinarum AK4, Caenispirillum salinarum JCM 17360, Caenispirillum salinarum MTCC 10963, Caenispirillum sp. AK4
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