STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C882_0204TonB-dependent receptor protein. (629 aa)    
Predicted Functional Partners:
C882_0177
Periplasmic binding protein TonB.
 
 
 0.983
C882_3732
Hypothetical protein.
   
 0.978
C882_0202
Iron compound ABC transporter, periplasmic substrate-binding protein.
 
  
 0.960
tolB
tolB protein precursor protein; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity.
  
 
 
 0.915
C882_0201
Vitamin B12 ABC transporter, permease component BtuC; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
     0.862
C882_0117
ATPase involved in chromosome partitioning.
    
 
 0.853
C882_1010
Chromosome (plasmid) partitioning protein ParA.
    
 
 0.853
C882_2289
Putative ATPase.
    
 
 0.853
C882_3235
Chromosome (plasmid) partitioning protein ParA.
    
 
 0.853
C882_2351
Ferric siderophore transport system, biopolymer transport protein ExbB.
 
  
 0.832
Your Current Organism:
Caenispirillum salinarum
NCBI taxonomy Id: 1238182
Other names: C. salinarum AK4, Caenispirillum salinarum AK4, Caenispirillum salinarum JCM 17360, Caenispirillum salinarum MTCC 10963, Caenispirillum sp. AK4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.