STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C882_0239Ribose ABC transporter, periplasmic ribose-binding protein RbsB. (360 aa)    
Predicted Functional Partners:
C882_1360
Hypothetical protein.
  
 0.994
C882_1376
Hypothetical protein.
   
 0.994
C882_3023
Hypothetical protein.
   
 0.990
C882_0307
Hypothetical protein.
   
 0.987
C882_1158
Ribose ABC transport system, permease protein RbsC; Belongs to the binding-protein-dependent transport system permease family.
 0.986
C882_0718
Ribose ABC transport system, permease protein RbsC; Belongs to the binding-protein-dependent transport system permease family.
 0.982
rbsA
Ribose ABC transport system, ATP-binding protein RbsA; Part of the ABC transporter complex RbsABC involved in ribose import. Responsible for energy coupling to the transport system. Belongs to the ABC transporter superfamily. Ribose importer (TC 3.A.1.2.1) family.
 
 0.982
C882_4434
Hypothetical protein.
  
 0.980
C882_0206
Hypothetical protein.
   
 0.979
C882_0208
Sensor protein barA.
   
 0.979
Your Current Organism:
Caenispirillum salinarum
NCBI taxonomy Id: 1238182
Other names: C. salinarum AK4, Caenispirillum salinarum AK4, Caenispirillum salinarum JCM 17360, Caenispirillum salinarum MTCC 10963, Caenispirillum sp. AK4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.