STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C882_0321ABC-type tungstate transport system, periplasmic binding protein. (276 aa)    
Predicted Functional Partners:
C882_0323
ABC-type tungstate transport system, permease protein.
 
  
 0.977
C882_0320
ABC-type tungstate transport system, ATP-binding protein.
 
 
  0.976
C882_0322
Hypothetical protein.
 
     0.788
fdhD
Formate dehydrogenase chain D; Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH. Belongs to the FdhD family.
 
     0.782
C882_0328
Putative formate dehydrogenase-specific chaperone.
 
     0.768
C882_0330
Formate dehydrogenase-O, major subunit; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
 
     0.767
C882_0324
Iron-sulfur cluster-binding protein.
 
     0.759
C882_0332
Formate dehydrogenase -O, gamma subunit.
 
   
 0.759
C882_0327
Hypothetical protein.
 
     0.754
C882_0331
Formate dehydrogenase-O, iron-sulfur subunit.
 
   
 0.727
Your Current Organism:
Caenispirillum salinarum
NCBI taxonomy Id: 1238182
Other names: C. salinarum AK4, Caenispirillum salinarum AK4, Caenispirillum salinarum JCM 17360, Caenispirillum salinarum MTCC 10963, Caenispirillum sp. AK4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.