STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C882_0394Putative lipoprotein precursor. (191 aa)    
Predicted Functional Partners:
C882_0396
Hypothetical protein.
 
  
 0.958
C882_0397
Amine oxidase, flavin-containing.
 
   
 0.913
C882_0395
Cyclopropane-fatty-acyl-phospholipid synthase, plant type.
 
   
 0.911
C882_0392
Oxidoreductase, short-chain dehydrogenase/reductase family; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
 
    0.857
C882_2770
Oxidoreductase.
 
    0.836
C882_0399
Anti-sigma factor.
 
   
 0.798
C882_0393
Putative transcriptional regulator.
 
     0.797
C882_4567
Oxidoreductase.
 
    0.613
C882_0398
RNA polymerase sigma-70 factor, ECF subfamily.
 
     0.595
C882_2872
Cobalt/zinc/cadmium efflux RND transporter; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
  
 0.570
Your Current Organism:
Caenispirillum salinarum
NCBI taxonomy Id: 1238182
Other names: C. salinarum AK4, Caenispirillum salinarum AK4, Caenispirillum salinarum JCM 17360, Caenispirillum salinarum MTCC 10963, Caenispirillum sp. AK4
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