STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C882_0499Hypothetical protein. (513 aa)    
Predicted Functional Partners:
C882_3486
Hypothetical protein.
 
 0.932
C882_0237
Multi-sensor Hybrid Histidine Kinase.
 
 
 0.930
C882_0208
Sensor protein barA.
 
 
 0.928
C882_0206
Hypothetical protein.
 
 
 0.927
C882_1544
Periplasmic sensor hybrid histidine kinase.
 
 0.921
C882_0498
Two component transcriptional regulator, LuxR family protein.
 
  
 0.914
C882_3023
Hypothetical protein.
 
 
 0.909
C882_4399
Chemotaxis protein methyltransferase CheR.
  
 0.905
C882_1360
Hypothetical protein.
 
0.900
C882_1376
Hypothetical protein.
 
 
0.885
Your Current Organism:
Caenispirillum salinarum
NCBI taxonomy Id: 1238182
Other names: C. salinarum AK4, Caenispirillum salinarum AK4, Caenispirillum salinarum JCM 17360, Caenispirillum salinarum MTCC 10963, Caenispirillum sp. AK4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.