STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C882_1146Isomerase. (118 aa)    
Predicted Functional Partners:
C882_1386
2-hydroxyhepta-2,4-diene-1,7-dioate isomerase.
  
 
 0.821
C882_3363
Fumarylacetoacetate hydrolase family protein.
  
 
 0.821
C882_1144
TRAP-type C4-dicarboxylate transport system, large permease component.
       0.773
C882_1145
Putative N-acetylneuraminate transporter.
       0.773
C882_3201
Fumarylacetoacetate hydrolase family protein.
  
 
 0.745
C882_2276
Fumarylacetoacetase.
  
 
 0.723
C882_4404
Putative cytoplasmic protein.
  
  
 0.707
betB
Betaine aldehyde dehydrogenase; Involved in the biosynthesis of the osmoprotectant glycine betaine. Catalyzes the reversible oxidation of betaine aldehyde to the corresponding acid.
  
 
 0.486
C882_0500
Succinate-semialdehyde dehydrogenase.
  
 
 0.486
C882_0857
Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
  
 
 0.486
Your Current Organism:
Caenispirillum salinarum
NCBI taxonomy Id: 1238182
Other names: C. salinarum AK4, Caenispirillum salinarum AK4, Caenispirillum salinarum JCM 17360, Caenispirillum salinarum MTCC 10963, Caenispirillum sp. AK4
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