STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C882_12332-oxoglutarate oxidoreductase, beta subunit. (349 aa)    
Predicted Functional Partners:
C882_1234
2-oxoglutarate oxidoreductase, alpha subunit.
 0.999
C882_4213
2-oxoglutarate oxidoreductase, alpha subunit.
 0.999
C882_3923
Indolepyruvate ferredoxin oxidoreductase; Alpha and beta subunits.
  
 0.996
C882_3699
Ferredoxin-type protein NapG (periplasmic nitrate reductase).
  
 0.881
C882_0324
Iron-sulfur cluster-binding protein.
  
 
 0.880
C882_0578
NADP-dependent malic enzyme.
   
 0.862
C882_2136
NADP-dependent malic enzyme.
   
 0.862
C882_0269
Malonyl CoA-acyl carrier protein transacylase.
    
 0.861
C882_3046
Glutamate synthase [NADPH] large chain.
  
 
 0.852
C882_0270
Malonyl CoA-acyl carrier protein transacylase.
  
 
 0.849
Your Current Organism:
Caenispirillum salinarum
NCBI taxonomy Id: 1238182
Other names: C. salinarum AK4, Caenispirillum salinarum AK4, Caenispirillum salinarum JCM 17360, Caenispirillum salinarum MTCC 10963, Caenispirillum sp. AK4
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.