STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C882_1372Hypothetical protein. (477 aa)    
Predicted Functional Partners:
C882_1360
Hypothetical protein.
 
0.986
C882_0949
Pyruvate dehydrogenase E1 component beta subunit; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO2.
    
 0.981
C882_3568
Hypothetical protein.
 
0.974
C882_1371
CheY-like receiver domain protein.
 0.973
C882_1376
Hypothetical protein.
 
0.965
C882_2009
DNA-binding response regulator PetR.
 0.942
C882_3356
Chemotaxis protein methyltransferase CheR.
   
 0.922
C882_4518
Two-component sensor histidine kinase.
0.914
C882_2397
Two-component sensor histidine kinase.
0.911
C882_0627
Response regulator GltR protein.
 0.888
Your Current Organism:
Caenispirillum salinarum
NCBI taxonomy Id: 1238182
Other names: C. salinarum AK4, Caenispirillum salinarum AK4, Caenispirillum salinarum JCM 17360, Caenispirillum salinarum MTCC 10963, Caenispirillum sp. AK4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.