STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C882_1615Branched-chain amino acid ABC transporter. (448 aa)    
Predicted Functional Partners:
C882_1617
Branched-chain amino acid transport system permease protein LivM; Belongs to the binding-protein-dependent transport system permease family.
 
 
  0.991
C882_1616
Putative ABC transporter subunit; Belongs to the binding-protein-dependent transport system permease family.
 
 
  0.990
C882_1618
Branched-chain amino acid ABC transporter.
 
 
 0.975
C882_0519
Branched-chain amino acid transport system permease protein LivM; Belongs to the binding-protein-dependent transport system permease family.
 
 
 0.959
C882_1619
Branched-chain amino acid ABC transporter.
 
 
  0.946
C882_0520
ABC transporter substrate-binding protein.
  
  
 
0.841
C882_4011
Branched-chain amino acid transport system permease protein LivM; Belongs to the binding-protein-dependent transport system permease family.
  
 
  0.837
C882_0739
Response regulator NasT.
  
 
 0.830
C882_1478
High-affinity branched-chain amino acid transport system permease protein LivH; Belongs to the binding-protein-dependent transport system permease family.
 
 
  0.826
C882_2722
High-affinity branched-chain amino acid transport system permease protein LivH; Belongs to the binding-protein-dependent transport system permease family.
 
 
  0.824
Your Current Organism:
Caenispirillum salinarum
NCBI taxonomy Id: 1238182
Other names: C. salinarum AK4, Caenispirillum salinarum AK4, Caenispirillum salinarum JCM 17360, Caenispirillum salinarum MTCC 10963, Caenispirillum sp. AK4
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