Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| C882_1672 | C882_1673 | C882_1672 | C882_1673 | Photosynthetic reaction center cytochrome c subunit; The reaction center of purple bacteria contains a tightly bound cytochrome molecule which re-reduces the photo oxidized primary electron donor. | Photosynthetic reaction center M subunit; The reaction center is a membrane-bound complex that mediates the initial photochemical event in the electron transfer process of photosynthesis. | 0.999 |
| C882_1672 | C882_1674 | C882_1672 | C882_1674 | Photosynthetic reaction center cytochrome c subunit; The reaction center of purple bacteria contains a tightly bound cytochrome molecule which re-reduces the photo oxidized primary electron donor. | Photosynthetic reaction center L subunit. | 0.999 |
| C882_1672 | C882_1675 | C882_1672 | C882_1675 | Photosynthetic reaction center cytochrome c subunit; The reaction center of purple bacteria contains a tightly bound cytochrome molecule which re-reduces the photo oxidized primary electron donor. | Light-harvesting LHI, alpha subunit; Antenna complexes are light-harvesting systems, which transfer the excitation energy to the reaction centers. | 0.997 |
| C882_1672 | C882_1676 | C882_1672 | C882_1676 | Photosynthetic reaction center cytochrome c subunit; The reaction center of purple bacteria contains a tightly bound cytochrome molecule which re-reduces the photo oxidized primary electron donor. | Light-harvesting protein; Antenna complexes are light-harvesting systems, which transfer the excitation energy to the reaction centers. | 0.997 |
| C882_1672 | C882_1677 | C882_1672 | C882_1677 | Photosynthetic reaction center cytochrome c subunit; The reaction center of purple bacteria contains a tightly bound cytochrome molecule which re-reduces the photo oxidized primary electron donor. | Chlorophyllide reductase subunit BchZ. | 0.964 |
| C882_1672 | C882_1679 | C882_1672 | C882_1679 | Photosynthetic reaction center cytochrome c subunit; The reaction center of purple bacteria contains a tightly bound cytochrome molecule which re-reduces the photo oxidized primary electron donor. | Chlorophyllide reductase subunit BchX; Belongs to the NifH/BchL/ChlL family. | 0.907 |
| C882_1672 | C882_1691 | C882_1672 | C882_1691 | Photosynthetic reaction center cytochrome c subunit; The reaction center of purple bacteria contains a tightly bound cytochrome molecule which re-reduces the photo oxidized primary electron donor. | Photosynthetic reaction center H subunit. | 0.998 |
| C882_1672 | C882_4117 | C882_1672 | C882_4117 | Photosynthetic reaction center cytochrome c subunit; The reaction center of purple bacteria contains a tightly bound cytochrome molecule which re-reduces the photo oxidized primary electron donor. | Regulator of cell morphogenesis and NO signaling. | 0.960 |
| C882_1672 | C882_4221 | C882_1672 | C882_4221 | Photosynthetic reaction center cytochrome c subunit; The reaction center of purple bacteria contains a tightly bound cytochrome molecule which re-reduces the photo oxidized primary electron donor. | Hypothetical protein. | 0.960 |
| C882_1672 | bchL | C882_1672 | C882_1694 | Photosynthetic reaction center cytochrome c subunit; The reaction center of purple bacteria contains a tightly bound cytochrome molecule which re-reduces the photo oxidized primary electron donor. | Light-independent protochlorophyllide reductase iron-sulfur ATP-binding protein ChlL; Component of the dark-operative protochlorophyllide reductase (DPOR) that uses Mg-ATP and reduced ferredoxin to reduce ring D of protochlorophyllide (Pchlide) to form chlorophyllide a (Chlide). This reaction is light-independent. The L component serves as a unique electron donor to the NB-component of the complex, and binds Mg-ATP. | 0.831 |
| C882_1673 | C882_1672 | C882_1673 | C882_1672 | Photosynthetic reaction center M subunit; The reaction center is a membrane-bound complex that mediates the initial photochemical event in the electron transfer process of photosynthesis. | Photosynthetic reaction center cytochrome c subunit; The reaction center of purple bacteria contains a tightly bound cytochrome molecule which re-reduces the photo oxidized primary electron donor. | 0.999 |
| C882_1673 | C882_1674 | C882_1673 | C882_1674 | Photosynthetic reaction center M subunit; The reaction center is a membrane-bound complex that mediates the initial photochemical event in the electron transfer process of photosynthesis. | Photosynthetic reaction center L subunit. | 0.999 |
| C882_1673 | C882_1675 | C882_1673 | C882_1675 | Photosynthetic reaction center M subunit; The reaction center is a membrane-bound complex that mediates the initial photochemical event in the electron transfer process of photosynthesis. | Light-harvesting LHI, alpha subunit; Antenna complexes are light-harvesting systems, which transfer the excitation energy to the reaction centers. | 0.999 |
| C882_1673 | C882_1676 | C882_1673 | C882_1676 | Photosynthetic reaction center M subunit; The reaction center is a membrane-bound complex that mediates the initial photochemical event in the electron transfer process of photosynthesis. | Light-harvesting protein; Antenna complexes are light-harvesting systems, which transfer the excitation energy to the reaction centers. | 0.999 |
| C882_1673 | C882_1677 | C882_1673 | C882_1677 | Photosynthetic reaction center M subunit; The reaction center is a membrane-bound complex that mediates the initial photochemical event in the electron transfer process of photosynthesis. | Chlorophyllide reductase subunit BchZ. | 0.968 |
| C882_1673 | C882_1679 | C882_1673 | C882_1679 | Photosynthetic reaction center M subunit; The reaction center is a membrane-bound complex that mediates the initial photochemical event in the electron transfer process of photosynthesis. | Chlorophyllide reductase subunit BchX; Belongs to the NifH/BchL/ChlL family. | 0.967 |
| C882_1673 | C882_1691 | C882_1673 | C882_1691 | Photosynthetic reaction center M subunit; The reaction center is a membrane-bound complex that mediates the initial photochemical event in the electron transfer process of photosynthesis. | Photosynthetic reaction center H subunit. | 0.999 |
| C882_1673 | C882_4117 | C882_1673 | C882_4117 | Photosynthetic reaction center M subunit; The reaction center is a membrane-bound complex that mediates the initial photochemical event in the electron transfer process of photosynthesis. | Regulator of cell morphogenesis and NO signaling. | 0.959 |
| C882_1673 | C882_4221 | C882_1673 | C882_4221 | Photosynthetic reaction center M subunit; The reaction center is a membrane-bound complex that mediates the initial photochemical event in the electron transfer process of photosynthesis. | Hypothetical protein. | 0.959 |
| C882_1673 | bchL | C882_1673 | C882_1694 | Photosynthetic reaction center M subunit; The reaction center is a membrane-bound complex that mediates the initial photochemical event in the electron transfer process of photosynthesis. | Light-independent protochlorophyllide reductase iron-sulfur ATP-binding protein ChlL; Component of the dark-operative protochlorophyllide reductase (DPOR) that uses Mg-ATP and reduced ferredoxin to reduce ring D of protochlorophyllide (Pchlide) to form chlorophyllide a (Chlide). This reaction is light-independent. The L component serves as a unique electron donor to the NB-component of the complex, and binds Mg-ATP. | 0.935 |
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