STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C882_1984Hypothetical protein. (222 aa)    
Predicted Functional Partners:
C882_1416
Cell division protein FtsK; Belongs to the FtsK/SpoIIIE/SftA family.
   
 
 0.948
C882_3032
Cell division protein FtsK.
   
 
 0.948
C882_1983
Hypothetical protein.
       0.594
C882_1982
Head-TO-tail joining protein.
       0.590
C882_1985
Hypothetical protein.
       0.530
C882_1980
Hypothetical protein.
       0.471
C882_1979
Hypothetical protein.
       0.453
C882_1981
Hypothetical protein.
       0.432
Your Current Organism:
Caenispirillum salinarum
NCBI taxonomy Id: 1238182
Other names: C. salinarum AK4, Caenispirillum salinarum AK4, Caenispirillum salinarum JCM 17360, Caenispirillum salinarum MTCC 10963, Caenispirillum sp. AK4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.