STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C882_2044Sulfur oxidation protein SoxZ. (108 aa)    
Predicted Functional Partners:
C882_2045
Sulfur oxidation protein SoxY.
 
 
 0.999
C882_2042
Sulfur oxidation protein SoxB; Belongs to the 5'-nucleotidase family.
 
 
 0.995
C882_2043
Sulfur oxidation protein SoxA.
 
  
 0.988
C882_0655
Periplasmic 5'-nucleotidase; Belongs to the 5'-nucleotidase family.
 
 
 0.987
C882_0861
Hypothetical protein.
   
 0.982
C882_2046
Sulfur oxidation protein SoxX.
 
  
 0.974
C882_2039
Sulfite dehydrogenase cytochrome subunit SoxD.
 
  
 0.965
C882_2040
Sulfur oxidation molybdopterin C protein.
 
  
 0.931
cysD
Sulfate adenylyltransferase subunit 2.
     
 0.859
cysC
Sulfate adenylyltransferase subunit 1; Catalyzes the synthesis of activated sulfate. Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. CysN/NodQ subfamily.
     
 0.850
Your Current Organism:
Caenispirillum salinarum
NCBI taxonomy Id: 1238182
Other names: C. salinarum AK4, Caenispirillum salinarum AK4, Caenispirillum salinarum JCM 17360, Caenispirillum salinarum MTCC 10963, Caenispirillum sp. AK4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.