STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C882_2172ABC-type polar amino acid transport system, ATPase component. (270 aa)    
Predicted Functional Partners:
C882_0180
Cystine ABC transporter, permease protein.
 0.998
C882_1650
Glutamate transport membrane-spanning protein.
 0.998
C882_2173
Putative ABC transporter permease protein.
 0.998
C882_2174
Glutamate Aspartate transport system permease protein GltJ.
 
 
 0.991
C882_1128
Polar amino acid ABC transporter, inner membrane subunit.
 
 0.976
C882_2175
Glutamate Aspartate periplasmic binding protein precursor GltI; Belongs to the bacterial solute-binding protein 3 family.
 
 0.972
C882_4429
Asparagine ABC transporter.
 
 0.951
C882_1130
Amino acid ABC transporter, periplasmic amino acid-binding protein; Belongs to the bacterial solute-binding protein 3 family.
 0.945
C882_1129
Arginine ABC transporter, permease protein ArtQ.
  
 0.921
C882_0179
Periplasmic cystine-binding protein FliY; Belongs to the bacterial solute-binding protein 3 family.
 0.900
Your Current Organism:
Caenispirillum salinarum
NCBI taxonomy Id: 1238182
Other names: C. salinarum AK4, Caenispirillum salinarum AK4, Caenispirillum salinarum JCM 17360, Caenispirillum salinarum MTCC 10963, Caenispirillum sp. AK4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.