STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C882_2418Phosphoesterase. (227 aa)    
Predicted Functional Partners:
C882_2417
Hypothetical protein.
     0.941
C882_2416
Putative permease.
 
     0.823
C882_4583
Dolichol-phosphate mannosyltransferase.
    0.708
C882_2410
Membrane-associated phospholipid phosphatase.
 
  
 0.648
C882_2415
Cob(I)alamin adenosyltransferase PduO; Belongs to the Cob(I)alamin adenosyltransferase family.
       0.515
C882_2450
Type cbb3 cytochrome oxidase biogenesis protein CcoH.
  
     0.491
C882_2411
Hypothetical protein.
 
   
 0.482
C882_2419
Amidase; Belongs to the amidase family.
       0.479
C882_4250
Hypothetical protein.
  
     0.478
C882_2699
Chemotaxis protein.
  
     0.431
Your Current Organism:
Caenispirillum salinarum
NCBI taxonomy Id: 1238182
Other names: C. salinarum AK4, Caenispirillum salinarum AK4, Caenispirillum salinarum JCM 17360, Caenispirillum salinarum MTCC 10963, Caenispirillum sp. AK4
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