STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C882_2683Two-component response regulator. (262 aa)    
Predicted Functional Partners:
C882_4399
Chemotaxis protein methyltransferase CheR.
 
 0.998
C882_0689
Chemotaxis protein methyltransferase CheR.
 
 0.995
C882_3568
Hypothetical protein.
  
 0.991
C882_1360
Hypothetical protein.
  
 0.990
C882_0237
Multi-sensor Hybrid Histidine Kinase.
  
 0.980
C882_1376
Hypothetical protein.
  
 0.975
C882_3023
Hypothetical protein.
  
 0.957
C882_4434
Hypothetical protein.
  
 0.954
C882_2207
Flagellar motor switch protein FliM; FliM is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation.
  
 0.946
C882_3651
Signal transduction histidine kinase.
 
 0.942
Your Current Organism:
Caenispirillum salinarum
NCBI taxonomy Id: 1238182
Other names: C. salinarum AK4, Caenispirillum salinarum AK4, Caenispirillum salinarum JCM 17360, Caenispirillum salinarum MTCC 10963, Caenispirillum sp. AK4
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