STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C882_2886Ferredoxin, 2Fe-2S. (109 aa)    
Predicted Functional Partners:
C882_2887
Cysteine desulfurase.
 0.997
C882_0269
Malonyl CoA-acyl carrier protein transacylase.
  
 0.991
C882_3792
Cysteine desulfurase, NifS subfamily; Catalyzes the removal of elemental sulfur atoms from cysteine to produce alanine.
 0.990
C882_2435
Putative iron-sulfur cluster assembly scaffold protein for SUF system, SufE2.
  
 0.980
C882_3502
Putative iron-sulfur cluster assembly scaffold protein for SUF system, SufE2.
  
 0.980
C882_3791
Iron-sulfur cluster assembly scaffold protein NifU; May be involved in the formation or repair of [Fe-S] clusters present in iron-sulfur proteins.
 
 0.980
C882_4533
Iron binding protein IscA; Belongs to the HesB/IscA family.
 
 
 0.958
C882_2271
Putative cytochrome P450 hydroxylase.
  
 0.955
C882_0976
Ferredoxin--NADP(+) reductase.
  
 
 0.954
C882_4018
Ferredoxin--NADP(+) reductase.
  
 
 0.953
Your Current Organism:
Caenispirillum salinarum
NCBI taxonomy Id: 1238182
Other names: C. salinarum AK4, Caenispirillum salinarum AK4, Caenispirillum salinarum JCM 17360, Caenispirillum salinarum MTCC 10963, Caenispirillum sp. AK4
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