STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C882_3149Pterin-4-alpha-carbinolamine dehydratase. (104 aa)    
Predicted Functional Partners:
hmgA
Homogentisate 1,2-dioxygenase; Involved in the catabolism of homogentisate (2,5- dihydroxyphenylacetate or 2,5-OH-PhAc), a central intermediate in the degradation of phenylalanine and tyrosine. Catalyzes the oxidative ring cleavage of the aromatic ring of homogentisate to yield maleylacetoacetate.
 
  
 0.728
C882_2271
Putative cytochrome P450 hydroxylase.
  
 
 0.696
C882_4046
Phenylacetate-CoA oxygenase/reductase, PaaK subunit.
  
 
 0.679
C882_3148
Acetylglutamate kinase.
       0.672
C882_3640
Homogentisate 1,2-dioxygenase.
  
  
 0.662
C882_0366
Oxidoreductase, short-chain dehydrogenase/reductase family.
    
  0.630
C882_3915
Ferredoxin--NADP(+) reductase.
    
 0.625
C882_1267
Putative reductase RutE.
  
 
  0.624
C882_1728
Cobalamin biosynthesis protein BluB.
  
 
  0.624
C882_4000
Hypothetical protein.
  
 
  0.624
Your Current Organism:
Caenispirillum salinarum
NCBI taxonomy Id: 1238182
Other names: C. salinarum AK4, Caenispirillum salinarum AK4, Caenispirillum salinarum JCM 17360, Caenispirillum salinarum MTCC 10963, Caenispirillum sp. AK4
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