STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C882_3372Hypothetical protein. (524 aa)    
Predicted Functional Partners:
C882_0172
Hypothetical protein.
    
 
 0.894
C882_3228
Thymidylate kinase.
    
 
 0.889
C882_1416
Cell division protein FtsK; Belongs to the FtsK/SpoIIIE/SftA family.
    
 
 0.823
C882_3032
Cell division protein FtsK.
    
 
 0.823
C882_0270
Malonyl CoA-acyl carrier protein transacylase.
  
 0.806
C882_1489
Hypothetical protein.
  
 0.750
C882_4457
Hypothetical protein.
  
 0.750
C882_3374
Hypothetical protein.
 
   
 0.707
C882_3371
Hypothetical protein.
       0.686
C882_3373
Hypothetical protein.
       0.675
Your Current Organism:
Caenispirillum salinarum
NCBI taxonomy Id: 1238182
Other names: C. salinarum AK4, Caenispirillum salinarum AK4, Caenispirillum salinarum JCM 17360, Caenispirillum salinarum MTCC 10963, Caenispirillum sp. AK4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.