STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C882_3707Substrate-binding region of ABC-type glycine betaine transporter. (311 aa)    
Predicted Functional Partners:
C882_3708
Osmoprotectant ABC transporter permease protein YehY.
 
 0.999
C882_3710
Osmoprotectant ABC transporter inner membrane protein YehW.
 
 0.999
C882_3617
L-proline glycine betaine ABC transport system permease protein ProW.
 
 0.997
C882_3619
L-proline glycine betaine ABC transport system permease protein ProW.
 
 0.997
C882_3709
L-proline glycine betaine ABC transport system permease protein ProV.
 0.996
C882_3618
L-proline glycine betaine ABC transport system permease protein ProV.
 0.986
C882_0906
L-proline glycine betaine ABC transport system permease protein ProW.
 
 
  
 0.866
C882_3711
Hypothetical protein.
       0.732
C882_1213
Chloride channel protein.
    
  0.703
C882_0101
Putrescine transport ATP-binding protein PotA; Belongs to the ABC transporter superfamily.
    
  0.695
Your Current Organism:
Caenispirillum salinarum
NCBI taxonomy Id: 1238182
Other names: C. salinarum AK4, Caenispirillum salinarum AK4, Caenispirillum salinarum JCM 17360, Caenispirillum salinarum MTCC 10963, Caenispirillum sp. AK4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.