STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C882_4086Hydrogenase maturation factor HoxV/HupK. (358 aa)    
Predicted Functional Partners:
C882_4092
Uptake hydrogenase large subunit; Belongs to the [NiFe]/[NiFeSe] hydrogenase large subunit family.
 
 
 0.986
C882_4114
NAD-reducing hydrogenase subunit HoxY.
  
 0.985
C882_4093
Uptake hydrogenase small subunit precursor.
 
  
 0.980
hypA
[NiFe] hydrogenase nickel incorporation protein HypA; Involved in the maturation of [NiFe] hydrogenases. Required for nickel insertion into the metal center of the hydrogenase.
 
  
 0.955
C882_4084
[NiFe] hydrogenase nickel incorporation-associated protein HypB.
 
   
 0.952
C882_4087
Putative hydrogenase expression/formation protein HupJ.
 
    0.951
C882_4088
Hydrogenase maturation factor HoxQ.
 
    0.951
C882_4081
[NiFe] hydrogenase metallocenter assembly protein HypD; Belongs to the HypD family.
 
   
 0.938
C882_4083
[NiFe] hydrogenase metallocenter assembly protein HypF.
 
   
 0.924
C882_4091
Ni,Fe-hydrogenase I cytochrome b subunit.
 
  
 0.912
Your Current Organism:
Caenispirillum salinarum
NCBI taxonomy Id: 1238182
Other names: C. salinarum AK4, Caenispirillum salinarum AK4, Caenispirillum salinarum JCM 17360, Caenispirillum salinarum MTCC 10963, Caenispirillum sp. AK4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.