STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C882_4357Hypothetical protein. (73 aa)    
Predicted Functional Partners:
C882_3797
Hypothetical protein.
  
     0.715
C882_2102
Putative DNA-binding protein.
  
     0.707
C882_4356
Ferredoxin.
       0.613
C882_1167
Acyltransferase domain protein.
  
     0.609
C882_2739
Hypothetical protein.
  
     0.548
C882_1180
Hypothetical protein.
  
     0.546
C882_1094
Putative integral membrane protein.
  
     0.495
C882_2734
Hypothetical protein.
  
     0.448
C882_1166
Glycosyl transferase family 2.
  
     0.442
C882_0110
Cyclase/dehydrase.
  
     0.425
Your Current Organism:
Caenispirillum salinarum
NCBI taxonomy Id: 1238182
Other names: C. salinarum AK4, Caenispirillum salinarum AK4, Caenispirillum salinarum JCM 17360, Caenispirillum salinarum MTCC 10963, Caenispirillum sp. AK4
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.