STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C882_4573Lactoylglutathione lyase. (159 aa)    
Predicted Functional Partners:
gloB
Hydroxyacylglutathione hydrolase; Thiolesterase that catalyzes the hydrolysis of S-D-lactoyl- glutathione to form glutathione and D-lactic acid.
 
  
 0.949
C882_0269
Malonyl CoA-acyl carrier protein transacylase.
  
 0.901
C882_0412
Methylmalonyl-CoA mutase.
    
 0.884
C882_2060
Ethylmalonyl-CoA mutase, methylsuccinyl-CoA-forming.
    
 0.884
C882_0048
Hypothetical protein.
     
 0.860
trpB-2
Tryptophan synthase beta chain; The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine.
   
  0.850
C882_2702
D-3-phosphoglycerate dehydrogenase.
    
 0.837
C882_3984
Threonine dehydratase.
   
 
 0.831
C882_3776
Threonine dehydratase, catabolic.
   
 
 0.793
C882_3699
Ferredoxin-type protein NapG (periplasmic nitrate reductase).
  
 
 0.791
Your Current Organism:
Caenispirillum salinarum
NCBI taxonomy Id: 1238182
Other names: C. salinarum AK4, Caenispirillum salinarum AK4, Caenispirillum salinarum JCM 17360, Caenispirillum salinarum MTCC 10963, Caenispirillum sp. AK4
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