STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000350525_01107Unannotated protein. (338 aa)    
Predicted Functional Partners:
GCA_000350525_01106
Unannotated protein.
 
 
  0.982
GCA_000350525_01108
Unannotated protein.
 
 
  0.950
GCA_000350525_01999
Unannotated protein.
     
 0.871
GCA_000350525_01102
Unannotated protein.
 
  
 0.852
GCA_000350525_01136
Unannotated protein.
 
 
  0.835
GCA_000350525_01103
Unannotated protein.
 
    0.828
GCA_000350525_01118
Unannotated protein.
  
  
  0.804
GCA_000350525_01135
Unannotated protein.
  
  
  0.785
GCA_000350525_01116
Unannotated protein.
  
  
  0.761
GCA_000350525_01128
Unannotated protein.
 
    0.755
Your Current Organism:
Leucobacter salsicius
NCBI taxonomy Id: 1238186
Other names: L. salsicius M1-8, Leucobacter salsicius KACC 21127, Leucobacter salsicius M1-8, Leucobacter sp. M1-8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.