STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OOS07631.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (172 aa)    
Predicted Functional Partners:
B0188_00730
Bifunctional tRNA pseudouridine(32) synthase/ribosomal large subunit pseudouridine synthase RluA; Catalyzes the synthesis of pseudouridine from uracil-746 in 23S ribosomal RNA and from uracil-32 in the anticodon stem and loop of transfer RNAs; incomplete; partial in the middle of a contig; missing start and stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
     0.992
B0188_10920
Hypothetical protein; Frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.932
OOS05173.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.807
OOS05176.1
Peptide transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  0.794
OOS02172.1
Peptide transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  0.794
OOS05083.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.774
OOS01663.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.774
OOS02746.1
Transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  0.773
OOS00208.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  0.730
OOS04175.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.721
Your Current Organism:
Haemophilus felis
NCBI taxonomy Id: 123822
Other names: ATCC 49733, CCUG 31170, CIP 103890, DSM 21192, [. felis, [Haemophilus] felis, strain TI189
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.