STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ERG98998.1Spermidine/putrescine-binding periplasmic protein. (358 aa)    
Predicted Functional Partners:
ERG99000.1
ABC-type spermidine/putrescine transport system, permease component I.
 
 
 0.979
ERG99001.1
ABC-type spermidine/putrescine transport system, permease component II.
 
 
 0.974
ERG97438.1
ABC-type spermidine/putrescine transport system, permease component I.
 
 
 0.900
ERG98999.1
ABC-type spermidine/putrescine transport system, ATPase component.
 
  
  0.899
ERG98142.1
ABC-type spermidine/putrescine transport system, permease component I.
 
 
 0.899
ERG97437.1
ABC-type spermidine/putrescine transport system, permease component II.
 
 
 0.878
ERG98143.1
ABC-type spermidine/putrescine transport system, permease component II.
 
 
 0.873
ERH00250.1
Spermidine/putrescine-binding periplasmic protein.
  
  
 
0.600
ERG97562.1
Hypothetical protein.
  
     0.578
ERG98141.1
Spermidine/putrescine-binding periplasmic protein.
  
     0.543
Your Current Organism:
Haloquadratum sp. J07HQX50
NCBI taxonomy Id: 1238426
Other names: H. sp. J07HQX50
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.