STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ERG99253.1tRNA(1-methyladenosine) methyltransferase related protein. (245 aa)    
Predicted Functional Partners:
ERG98760.1
23S rRNA methylase.
   
  
 0.798
ERG98580.1
Small GTP-binding protein domain protein.
  
    0.749
rps8e
Ribosomal protein S8.e.
  
    0.740
ERG99254.1
Nascent polypeptide-associated complex protein.
       0.659
ERG98781.1
Putative DNA modification methylase.
  
  
 0.655
ERG97884.1
Pseudouridine synthase.
  
  
 0.615
ERG98373.1
Dimethyladenosine transferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. rRNA adenine N(6)-methyltransferase family.
  
  
 0.569
ERG98788.1
KH type 1 domain protein.
  
   0.542
trm1
tRNA(guanine-26,N2-N2) methyltransferase; Dimethylates a single guanine residue at position 26 of a number of tRNAs using S-adenosyl-L-methionine as donor of the methyl groups; Belongs to the class I-like SAM-binding methyltransferase superfamily. Trm1 family.
  
  
 0.536
ERG99624.1
RNA-binding protein involved in rRNA processing.
   
  
 0.518
Your Current Organism:
Haloquadratum sp. J07HQX50
NCBI taxonomy Id: 1238426
Other names: H. sp. J07HQX50
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