STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ERG99568.1Nucleoside-diphosphate-sugar epimerase. (269 aa)    
Predicted Functional Partners:
ERG99566.1
Nucleoside-diphosphate-sugar epimerase; Overlaps another CDS with the same product name.
 
  
  0.897
ERG99567.1
Nucleoside-diphosphate-sugar epimerase; Overlaps another CDS with the same product name.
 
  
 
0.869
ERG99569.1
Nucleoside-diphosphate-sugar epimerase.
 
  
  0.867
ERG97950.1
Nucleotide sugar dehydrogenase.
  
 0.822
ERG98087.1
Ribosomal protein S15P/S13E; Belongs to the universal ribosomal protein uS15 family.
 
  0.772
ERG98089.1
Ribosomal protein S3AE.
   
 0.771
rps14
Ribosomal protein S14; Binds 16S rRNA, required for the assembly of 30S particles.
   
  0.762
ERG98635.1
Ribosomal protein S23 (S12); With S4 and S5 plays an important role in translational accuracy. Located at the interface of the 30S and 50S subunits. Belongs to the universal ribosomal protein uS12 family.
   
 0.759
rps17
Archaeal ribosomal protein S17P; One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA.
   
  0.749
rps3
Ribosomal protein S3, eukaryotic/archaeal type; Binds the lower part of the 30S subunit head. Belongs to the universal ribosomal protein uS3 family.
   
 0.748
Your Current Organism:
Haloquadratum sp. J07HQX50
NCBI taxonomy Id: 1238426
Other names: H. sp. J07HQX50
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.