STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ERG99639.1Hypothetical protein. (106 aa)    
Predicted Functional Partners:
ERG99507.1
Hypothetical protein.
 
     0.695
ERG98784.1
Hypothetical protein.
  
     0.673
ERG98365.1
Uncharacterized protein conserved in archaea.
  
     0.669
tfe
Transcription initiation factor IIE, alpha subunit; Transcription factor that plays a role in the activation of archaeal genes transcribed by RNA polymerase. Facilitates transcription initiation by enhancing TATA-box recognition by TATA-box-binding protein (Tbp), and transcription factor B (Tfb) and RNA polymerase recruitment. Not absolutely required for transcription in vitro, but particularly important in cases where Tbp or Tfb function is not optimal. It dynamically alters the nucleic acid-binding properties of RNA polymerases by stabilizing the initiation complex and destabilizing [...]
  
   
 0.648
ERH00052.1
Zn-ribbon containing protein (DUF2072).
  
     0.640
ERG98387.1
Small nuclear ribonucleoprotein, LSM family.
 
     0.637
ERG98498.1
Phosphate uptake regulator.
  
  
 0.637
ERG97894.1
Putative transcriptional regulator.
  
   
 0.632
ERG99351.1
Hypothetical protein.
  
     0.616
ERG98347.1
Putative archaeal kinase.
  
     0.614
Your Current Organism:
Haloquadratum sp. J07HQX50
NCBI taxonomy Id: 1238426
Other names: H. sp. J07HQX50
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.