Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ERG98639.1 | ERG99531.1 | J07HQX50_02682 | J07HQX50_00678 | DNA-directed RNA polymerase subunit A; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | Early transcription elongation factor of RNA pol II, NGN section. | 0.891 |
ERG98639.1 | ERG99730.1 | J07HQX50_02682 | J07HQX50_00882 | DNA-directed RNA polymerase subunit A; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | DNA-directed RNA polymerase, rpoE. | 0.999 |
ERG98639.1 | eif2g | J07HQX50_02682 | J07HQX50_00884 | DNA-directed RNA polymerase subunit A; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | Translation initiation factor 2 subunit gamma; eIF-2 functions in the early steps of protein synthesis by forming a ternary complex with GTP and initiator tRNA. Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. EIF2G subfamily. | 0.689 |
ERG98639.1 | spt4 | J07HQX50_02682 | J07HQX50_00881 | DNA-directed RNA polymerase subunit A; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | DNA-directed RNA polymerase subunit E; Stimulates transcription elongation; Belongs to the archaeal Spt4 family. | 0.633 |
ERG99531.1 | ERG98639.1 | J07HQX50_00678 | J07HQX50_02682 | Early transcription elongation factor of RNA pol II, NGN section. | DNA-directed RNA polymerase subunit A; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.891 |
ERG99531.1 | spt4 | J07HQX50_00678 | J07HQX50_00881 | Early transcription elongation factor of RNA pol II, NGN section. | DNA-directed RNA polymerase subunit E; Stimulates transcription elongation; Belongs to the archaeal Spt4 family. | 0.999 |
ERG99725.1 | ERG99726.1 | J07HQX50_00877 | J07HQX50_00878 | Hypothetical protein. | Metallohydrolase, glycoprotease/Kae1 family. | 0.918 |
ERG99725.1 | ERG99728.1 | J07HQX50_00877 | J07HQX50_00880 | Hypothetical protein. | Uncharacterized protein conserved in archaea; Catalyzes the GTP-dependent phosphorylation of the 3'- hydroxyl group of dephosphocoenzyme A to form coenzyme A (CoA). | 0.679 |
ERG99725.1 | ERG99730.1 | J07HQX50_00877 | J07HQX50_00882 | Hypothetical protein. | DNA-directed RNA polymerase, rpoE. | 0.679 |
ERG99725.1 | ERG99731.1 | J07HQX50_00877 | J07HQX50_00883 | Hypothetical protein. | PilTVapc superfamily protein. | 0.679 |
ERG99725.1 | eif2g | J07HQX50_00877 | J07HQX50_00884 | Hypothetical protein. | Translation initiation factor 2 subunit gamma; eIF-2 functions in the early steps of protein synthesis by forming a ternary complex with GTP and initiator tRNA. Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. EIF2G subfamily. | 0.640 |
ERG99725.1 | rps24e | J07HQX50_00877 | J07HQX50_00879 | Hypothetical protein. | Ribosomal protein S24E; Belongs to the eukaryotic ribosomal protein eS24 family. | 0.876 |
ERG99725.1 | spt4 | J07HQX50_00877 | J07HQX50_00881 | Hypothetical protein. | DNA-directed RNA polymerase subunit E; Stimulates transcription elongation; Belongs to the archaeal Spt4 family. | 0.679 |
ERG99726.1 | ERG99725.1 | J07HQX50_00878 | J07HQX50_00877 | Metallohydrolase, glycoprotease/Kae1 family. | Hypothetical protein. | 0.918 |
ERG99726.1 | ERG99728.1 | J07HQX50_00878 | J07HQX50_00880 | Metallohydrolase, glycoprotease/Kae1 family. | Uncharacterized protein conserved in archaea; Catalyzes the GTP-dependent phosphorylation of the 3'- hydroxyl group of dephosphocoenzyme A to form coenzyme A (CoA). | 0.699 |
ERG99726.1 | ERG99730.1 | J07HQX50_00878 | J07HQX50_00882 | Metallohydrolase, glycoprotease/Kae1 family. | DNA-directed RNA polymerase, rpoE. | 0.755 |
ERG99726.1 | ERG99731.1 | J07HQX50_00878 | J07HQX50_00883 | Metallohydrolase, glycoprotease/Kae1 family. | PilTVapc superfamily protein. | 0.699 |
ERG99726.1 | eif2g | J07HQX50_00878 | J07HQX50_00884 | Metallohydrolase, glycoprotease/Kae1 family. | Translation initiation factor 2 subunit gamma; eIF-2 functions in the early steps of protein synthesis by forming a ternary complex with GTP and initiator tRNA. Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. EIF2G subfamily. | 0.802 |
ERG99726.1 | rps24e | J07HQX50_00878 | J07HQX50_00879 | Metallohydrolase, glycoprotease/Kae1 family. | Ribosomal protein S24E; Belongs to the eukaryotic ribosomal protein eS24 family. | 0.905 |
ERG99726.1 | spt4 | J07HQX50_00878 | J07HQX50_00881 | Metallohydrolase, glycoprotease/Kae1 family. | DNA-directed RNA polymerase subunit E; Stimulates transcription elongation; Belongs to the archaeal Spt4 family. | 0.699 |
page 1 of 4