STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ERG97465.1Deoxyribodipyrimidine photolyase. (549 aa)    
Predicted Functional Partners:
ERG98151.1
Deoxyribodipyrimidine photo-lyase-related protein.
 
   
 0.478
ERG99711.1
ABC-type multidrug transport system, ATPase and permease component.
  
 
 
 0.476
ERG98863.1
ABC-type multidrug transport system, ATPase and permease component.
  
 
 
 0.473
ERG99680.1
ABC-type multidrug transport system, ATPase and permease component.
  
 
 
 0.473
ERG98042.1
Rhodanese-related sulfurtransferase.
    
   0.418
infB
Translation initiation factor aIF-2/yIF-2; Function in general translation initiation by promoting the binding of the formylmethionine-tRNA to ribosomes. Seems to function along with eIF-2.
    
   0.418
Your Current Organism:
Haloquadratum sp. J07HQX50
NCBI taxonomy Id: 1238426
Other names: H. sp. J07HQX50
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.