Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ERG98087.1 | ERG98089.1 | J07HQX50_02119 | J07HQX50_02121 | Ribosomal protein S15P/S13E; Belongs to the universal ribosomal protein uS15 family. | Ribosomal protein S3AE. | 0.999 |
ERG98087.1 | ERG99516.1 | J07HQX50_02119 | J07HQX50_00663 | Ribosomal protein S15P/S13E; Belongs to the universal ribosomal protein uS15 family. | Translation initiation factor 2, alpha subunit (eIF-2alpha). | 0.999 |
ERG98087.1 | ERG99517.1 | J07HQX50_02119 | J07HQX50_00664 | Ribosomal protein S15P/S13E; Belongs to the universal ribosomal protein uS15 family. | Ribosomal protein L44E; Belongs to the eukaryotic ribosomal protein eL42 family. | 0.999 |
ERG98087.1 | rpl10e | J07HQX50_02119 | J07HQX50_00967 | Ribosomal protein S15P/S13E; Belongs to the universal ribosomal protein uS15 family. | Ribosomal protein L16/L10E; Belongs to the universal ribosomal protein uL16 family. | 0.999 |
ERG98087.1 | rpl15e | J07HQX50_02119 | J07HQX50_00802 | Ribosomal protein S15P/S13E; Belongs to the universal ribosomal protein uS15 family. | Ribosomal protein L15E; Belongs to the eukaryotic ribosomal protein eL15 family. | 0.999 |
ERG98087.1 | rpl37ae | J07HQX50_02119 | J07HQX50_00641 | Ribosomal protein S15P/S13E; Belongs to the universal ribosomal protein uS15 family. | Ribosomal protein L37AE/L43A; Binds to the 23S rRNA; Belongs to the eukaryotic ribosomal protein eL43 family. | 0.999 |
ERG98087.1 | rps11 | J07HQX50_02119 | J07HQX50_02367 | Ribosomal protein S15P/S13E; Belongs to the universal ribosomal protein uS15 family. | Archaeal ribosomal protein S11P; Located on the platform of the 30S subunit. Belongs to the universal ribosomal protein uS11 family. | 0.999 |
ERG98087.1 | rps13 | J07HQX50_02119 | J07HQX50_02365 | Ribosomal protein S15P/S13E; Belongs to the universal ribosomal protein uS15 family. | Archaeal ribosomal protein S13P; Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits; these bridges are implicated in subunit movement; Belongs to the universal ribosomal protein uS13 family. | 0.999 |
ERG98087.1 | rps24e | J07HQX50_02119 | J07HQX50_00879 | Ribosomal protein S15P/S13E; Belongs to the universal ribosomal protein uS15 family. | Ribosomal protein S24E; Belongs to the eukaryotic ribosomal protein eS24 family. | 0.999 |
ERG98087.1 | rps4 | J07HQX50_02119 | J07HQX50_02366 | Ribosomal protein S15P/S13E; Belongs to the universal ribosomal protein uS15 family. | Ribosomal protein S4; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit. | 0.999 |
ERG98089.1 | ERG98087.1 | J07HQX50_02121 | J07HQX50_02119 | Ribosomal protein S3AE. | Ribosomal protein S15P/S13E; Belongs to the universal ribosomal protein uS15 family. | 0.999 |
ERG98089.1 | ERG99516.1 | J07HQX50_02121 | J07HQX50_00663 | Ribosomal protein S3AE. | Translation initiation factor 2, alpha subunit (eIF-2alpha). | 0.999 |
ERG98089.1 | ERG99517.1 | J07HQX50_02121 | J07HQX50_00664 | Ribosomal protein S3AE. | Ribosomal protein L44E; Belongs to the eukaryotic ribosomal protein eL42 family. | 0.999 |
ERG98089.1 | rpl10e | J07HQX50_02121 | J07HQX50_00967 | Ribosomal protein S3AE. | Ribosomal protein L16/L10E; Belongs to the universal ribosomal protein uL16 family. | 0.999 |
ERG98089.1 | rpl15e | J07HQX50_02121 | J07HQX50_00802 | Ribosomal protein S3AE. | Ribosomal protein L15E; Belongs to the eukaryotic ribosomal protein eL15 family. | 0.999 |
ERG98089.1 | rpl37ae | J07HQX50_02121 | J07HQX50_00641 | Ribosomal protein S3AE. | Ribosomal protein L37AE/L43A; Binds to the 23S rRNA; Belongs to the eukaryotic ribosomal protein eL43 family. | 0.999 |
ERG98089.1 | rps11 | J07HQX50_02121 | J07HQX50_02367 | Ribosomal protein S3AE. | Archaeal ribosomal protein S11P; Located on the platform of the 30S subunit. Belongs to the universal ribosomal protein uS11 family. | 0.999 |
ERG98089.1 | rps13 | J07HQX50_02121 | J07HQX50_02365 | Ribosomal protein S3AE. | Archaeal ribosomal protein S13P; Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits; these bridges are implicated in subunit movement; Belongs to the universal ribosomal protein uS13 family. | 0.999 |
ERG98089.1 | rps24e | J07HQX50_02121 | J07HQX50_00879 | Ribosomal protein S3AE. | Ribosomal protein S24E; Belongs to the eukaryotic ribosomal protein eS24 family. | 0.999 |
ERG98089.1 | rps4 | J07HQX50_02121 | J07HQX50_02366 | Ribosomal protein S3AE. | Ribosomal protein S4; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit. | 0.999 |
page 1 of 6