STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
secFPreprotein translocase subunit SecF; Involved in protein export. (293 aa)    
Predicted Functional Partners:
secD
Preprotein translocase subunit SecD; Involved in protein export.
 
 0.999
ftsY
Signal recognition particle-docking protein FtsY; Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC).
 
  
 0.825
ERG98805.1
Signal recognition particle GTPase.
 
 
 0.743
ERG98806.1
Signal recognition particle GTPase.
  
 
 0.686
ERG98535.1
Hypothetical protein.
       0.643
ERH00057.1
Signal peptidase I.
  
  
 0.614
tatA
Twin arginine-targeting protein translocase, TatA/E family; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system.
  
  
 0.556
ERG99400.1
Archaea-specific RecJ-like exonuclease, contains DnaJ-type Zn finger domain protein.
  
     0.528
ERG98667.1
Archaeal/vacuolar-type H+-ATPase subunit C.
 
     0.523
ERG97453.1
Serine proteinase.
  
 
 0.518
Your Current Organism:
Haloquadratum sp. J07HQX50
NCBI taxonomy Id: 1238426
Other names: H. sp. J07HQX50
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.