STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C943_00965Hypothetical protein. (225 aa)    
Predicted Functional Partners:
C943_03937
Hypothetical protein.
  
 
   0.816
C943_03978
Outer membrane protein OmpA.
  
 
   0.815
C943_04510
Adenylate cyclase; Belongs to the adenylyl cyclase class-4/guanylyl cyclase family.
    
 0.789
C943_04098
Hypothetical protein.
  
    0.775
C943_03939
Hypothetical protein.
  
     0.771
C943_01769
Hypothetical protein.
  
     0.762
C943_02896
Hypothetical protein.
  
     0.754
C943_03110
PE-PGRS family protein.
  
     0.748
C943_02779
Putative type-4 fimbrial biogenesis pily1-related protein.
  
     0.747
C943_02967
Hypothetical protein.
  
     0.746
Your Current Organism:
Mariniradius saccharolyticus
NCBI taxonomy Id: 1239962
Other names: Aquiflexum sp. AK6, Cyclobacteriaceae bacterium AK6, M. saccharolyticus AK6, Mariniradius saccharolyticus AK6
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.