STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C943_03108Hypothetical protein. (141 aa)    
Predicted Functional Partners:
rpsJ
SSU ribosomal protein S10p (S20e); Involved in the binding of tRNA to the ribosomes. Belongs to the universal ribosomal protein uS10 family.
   
   0.752
rplN
LSU ribosomal protein L14p (L23e); Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome; Belongs to the universal ribosomal protein uL14 family.
    
   0.735
C943_01769
Hypothetical protein.
  
     0.717
C943_01557
Lactate dehydrogenase like protein.
    
  0.707
C943_03903
Zn-dependent hydroxyacylglutathione hydrolase.
   
 0.698
C943_01832
Metallo-beta-lactamase family protein.
    
 0.695
C943_04509
Catalase.
  
 0.690
C943_00965
Hypothetical protein.
  
     0.675
C943_03107
Prolyl endopeptidase.
     
 0.651
C943_03939
Hypothetical protein.
  
     0.641
Your Current Organism:
Mariniradius saccharolyticus
NCBI taxonomy Id: 1239962
Other names: Aquiflexum sp. AK6, Cyclobacteriaceae bacterium AK6, M. saccharolyticus AK6, Mariniradius saccharolyticus AK6
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.