STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
D081_0093Putative low-affinity inorganic phosphate transporter. (330 aa)    
Predicted Functional Partners:
D081_0094
Phosphate transport regulator.
 
  
 0.993
D081_1788
Pyruvate-flavodoxin oxidoreductase.
     
 0.617
pyrH
Uridylate kinase; Catalyzes the reversible phosphorylation of UMP to UDP.
   
    0.552
lysS
Lysyl-tRNA synthetase (class II); Belongs to the class-II aminoacyl-tRNA synthetase family.
   
    0.544
D081_0092
Uridine kinase.
     
 0.532
D081_2364
Glutamate synthase (NADPH) small chain.
     
 0.526
D081_0095
Biosynthetic Aromatic amino acid aminotransferase.
  
  
 0.513
D081_1302
NADH:flavin oxidoreductase/NADH oxidase.
  
  
 0.498
ribBA
3,4-dihydroxy-2-butanone 4-phosphate synthase / GTP cyclohydrolase II; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; In the C-terminal section; belongs to the GTP cyclohydrolase II family.
      
 0.495
D081_0291
Copper, lead, cadmium, zinc and mercury transporting ATPase.
  
  
 0.491
Your Current Organism:
Anaerovibrio sp. JC8
NCBI taxonomy Id: 1240085
Other names: A. sp. JC8
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