STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
D081_0464Hypothetical protein. (384 aa)    
Predicted Functional Partners:
glgB
1,4-alpha-glucan (glycogen) branching enzyme, GH-13-type; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily.
   
 0.968
D081_2007
Hypothetical protein.
   
 
 0.879
D081_0215
Mannose-1-phosphate guanylyltransferase (GDP).
  
 
 0.854
D081_0222
D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase.
  
 0.853
D081_0465
Glycosyl transferase, family 2.
  
 
 0.842
D081_1036
UDP-galactopyranose mutase.
  
 
 0.761
D081_1630
Long-chain-fatty-acid--CoA ligase.
    
 0.724
D081_0459
D-glycero-D-manno-heptose 1-phosphate guanosyltransferase.
  
 0.700
D081_0463
Hypothetical protein.
       0.697
D081_0431
dTDP-glucose 4,6-dehydratase; Belongs to the NAD(P)-dependent epimerase/dehydratase family. dTDP-glucose dehydratase subfamily.
  
 
 0.688
Your Current Organism:
Anaerovibrio sp. JC8
NCBI taxonomy Id: 1240085
Other names: A. sp. JC8
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.