STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
D081_1651Membrane protein, MgtC/SapB family. (229 aa)    
Predicted Functional Partners:
D081_0197
Copper, lead, cadmium, zinc and mercury transporting ATPase.
 
 
 0.813
D081_0912
Flagellar biosynthesis protein FliR; Role in flagellar biosynthesis. Belongs to the FliR/MopE/SpaR family.
    
   0.794
D081_0291
Copper, lead, cadmium, zinc and mercury transporting ATPase.
 
   
 0.641
D081_2122
Beta-propeller domains of methanol dehydrogenase type.
 
      0.539
D081_2129
Competence/damage-inducible protein CinA.
  
  
 0.536
D081_2188
Sensory box histidine kinase/response regulator.
  
  
 0.489
D081_1411
DNA-binding response regulator, AraC family.
  
 
 0.438
D081_1428
Sensory box/GGDEF family protein.
  
 
 0.438
Your Current Organism:
Anaerovibrio sp. JC8
NCBI taxonomy Id: 1240085
Other names: A. sp. JC8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.