STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ISGA_415Benzene 1,2-dioxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (179 aa)    
Predicted Functional Partners:
ISGA_414
Benzene 1,2-dioxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.999
ISGA_11645
Oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.998
ISGA_2061
Rieske (2Fe-2S) protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.991
ISGA_1435
Rieske (2Fe-2S) protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.990
ISGA_1455
(2Fe-2S)-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.979
ISGA_11825
3-ketosteroid-9-alpha-hydroxylase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.927
ISGA_11650
LuxR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.914
ISGA_1716
Muconolactone delta-isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the muconolactone Delta-isomerase family.
 
  
 0.892
ISGA_1717
Catechol 1,2-dioxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.828
ISGA_1442
Oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.807
Your Current Organism:
Gordonia sp. NB41Y
NCBI taxonomy Id: 1241906
Other names: G. sp. NB4-1Y, Gordonia sp. NB4-1Y
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.