STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ISGA_429Mammalian cell entry protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (442 aa)    
Predicted Functional Partners:
ISGA_426
ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.997
ISGA_427
ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.993
ISGA_428
ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.990
ISGA_430
ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.980
ISGA_431
ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.979
ISGA_505
ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.954
ISGA_1134
ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.941
ISGA_504
ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.939
ISGA_1494
ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.938
ISGA_1133
ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.930
Your Current Organism:
Gordonia sp. NB41Y
NCBI taxonomy Id: 1241906
Other names: G. sp. NB4-1Y, Gordonia sp. NB4-1Y
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.