STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mrdBRod shape-determining protein RodA; Belongs to the SEDS family. (505 aa)    
Predicted Functional Partners:
mrdA
Penicillin-binding protein 2.
 0.995
EMK00531.1
Penicillin-binding protein, transpeptidase domain protein.
 0.967
EMK01027.1
Cell shape determining protein, MreB/Mrl family.
 
 
 
 0.914
EMJ99683.1
POTRA domain protein, FtsQ-type; Essential cell division protein.
  
 
 0.900
murG
Glycosyltransferase family 28 N-terminal domain protein; Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II); Belongs to the glycosyltransferase 28 family. MurG subfamily.
 
  
 0.900
mraY
phospho-N-acetylmuramoyl-pentapeptide- transferase; First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan; Belongs to the glycosyltransferase 4 family. MraY subfamily.
 
 
 0.895
EMJ99911.1
Penicillin-binding protein, transpeptidase domain protein.
  
 0.884
EMK00305.1
Penicillin-binding protein, transpeptidase domain protein.
  
 0.884
mreD
Rod shape-determining protein MreD.
 
  
 0.862
murD
UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase; Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA). Belongs to the MurCDEF family.
 
  
 0.857
Your Current Organism:
Leptospira sp. B5022
NCBI taxonomy Id: 1242992
Other names: L. sp. B5-022, Leptospira sp. B5-022
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