STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EMK00391.1Chloride transporter, ClC family. (616 aa)    
Predicted Functional Partners:
guaA
GMP synthase (glutamine-hydrolyzing).
    
  0.941
EMK00290.1
CAAX protease self-immunity.
 
     0.856
EMK00576.1
Hypothetical protein.
       0.836
EMK01540.1
PAS domain S-box protein; This gene contains a nucleotide ambiguity which may be the result of a sequencing error.
    
 0.796
EMK00268.1
PAS domain S-box protein.
    
 0.796
EMK00489.1
Peptidase, M23 family.
       0.700
purH
Phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase.
    
  0.650
atpB
ATP synthase F0, A subunit; Key component of the proton channel; it plays a direct role in the translocation of protons across the membrane. Belongs to the ATPase A chain family.
    
 0.650
EMK02300.1
Haloacid dehalogenase-like hydrolase.
    
  0.642
apt
Adenine phosphoribosyltransferase; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis.
    
  0.631
Your Current Organism:
Leptospira sp. B5022
NCBI taxonomy Id: 1242992
Other names: L. sp. B5-022, Leptospira sp. B5-022
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