STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EKU11433.1Membrane protein; Belongs to the BI1 family. (233 aa)    
Predicted Functional Partners:
EKU11432.1
Thiamin-phosphate pyrophosphorylase.
       0.787
msrA
Peptide methionine sulfoxide reductase MsrA; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine.
  
   0.646
EKU11431.1
Preprotein translocase subunit SecG; Involved in protein export. Participates in an early event of protein translocation; Belongs to the SecG family.
     
 0.641
frr
Ribosome recycling factor; Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another; Belongs to the RRF family.
       0.614
EKU11430.1
Polysaccharide deacetylase.
       0.605
EKU11435.1
Potassium efflux system KefA protein / Small-conductance mechanosensitive channel.
  
    0.550
EKU11434.1
Carbonic anhydrase; Reversible hydration of carbon dioxide. Belongs to the beta-class carbonic anhydrase family.
       0.546
EKU11436.1
Hypothetical protein.
       0.490
htpX
Peptidase M48, Ste24p precursor; Belongs to the peptidase M48B family.
  
  
 0.455
Your Current Organism:
Campylobacter showae CSUNSWCD
NCBI taxonomy Id: 1244083
Other names: C. showae CSUNSWCD
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.