STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDY32126.1Glyoxylase, beta-lactamase superfamily II. (291 aa)    
Predicted Functional Partners:
SDZ40540.1
Sulfide:quinone oxidoreductase.
 
  
  0.766
SDZ27269.1
TIGR01244 family protein.
 
     0.634
SDZ10434.1
Rhodanese-related sulfurtransferase.
  
  0.612
SDZ40992.1
Rhodanese-related sulfurtransferase.
  
  0.602
SDZ39806.1
Sarcosine oxidase subunit alpha; Belongs to the GcvT family.
  
 
  0.596
SDY32167.1
2,4-dienoyl-CoA reductase (NADPH2).
  
    0.555
SDZ40493.1
Hypothetical protein.
 
     0.542
SDZ40509.1
Hypothetical protein.
 
     0.499
SDY74488.1
Rhodanese-related sulfurtransferase.
  
  0.442
SDY67190.1
Thiosulfate/3-mercaptopyruvate sulfurtransferase.
   
 
 0.410
Your Current Organism:
Jannaschia faecimaris
NCBI taxonomy Id: 1244108
Other names: CCUG 63415, DSM 100420, J. faecimaris, Jannaschia faecimaris Jung and Yoon 2014, Jannaschia sp. HD-22, KCTC 32179, strain HD-22
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.