STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDY68160.1TIGR02302 family protein. (871 aa)    
Predicted Functional Partners:
lysA
Diaminopimelate decarboxylase; Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine.
       0.790
SDY68095.1
Protein of unknown function.
       0.781
SDY47125.1
N-terminal double-transmembrane domain-containing protein.
  
    0.773
SDY47164.1
Hypothetical protein.
  
     0.772
SDY47087.1
MoxR-like ATPase.
  
     0.761
SDZ21982.1
Hypothetical glycoside hydrolase 5.
    
  0.704
SDZ02739.1
HemY protein.
  
    0.698
SDZ11479.1
Tetratricopeptide repeat-containing protein.
  
     0.689
SDY31148.1
DNA polymerase III, delta subunit.
  
     0.683
guaA
GMP synthase (glutamine-hydrolyzing); Catalyzes the synthesis of GMP from XMP.
  
 
  0.649
Your Current Organism:
Jannaschia faecimaris
NCBI taxonomy Id: 1244108
Other names: CCUG 63415, DSM 100420, J. faecimaris, Jannaschia faecimaris Jung and Yoon 2014, Jannaschia sp. HD-22, KCTC 32179, strain HD-22
Server load: low (20%) [HD]