STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDY94093.1Disulfide bond formation protein DsbB. (156 aa)    
Predicted Functional Partners:
SDY94129.1
Membrane protein YqaA, SNARE-associated domain.
       0.865
SDY32511.1
Thioredoxin.
 
 
 0.732
SDZ32275.1
Hypothetical protein.
 
 
 0.729
SDY94162.1
Hypothetical protein.
       0.675
SDZ00840.1
Protein-disulfide isomerase.
  
 
 0.661
SDY39470.1
Predicted lipid-binding transport protein, Tim44 family.
  
     0.635
guaB
IMP dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family.
   
 
 0.607
SDY92770.1
Histidine phosphotransferase ChpT.
  
     0.581
SDZ09416.1
DnaJ domain-containing protein.
  
     0.531
SDY32550.1
Hypothetical protein.
  
     0.522
Your Current Organism:
Jannaschia faecimaris
NCBI taxonomy Id: 1244108
Other names: CCUG 63415, DSM 100420, J. faecimaris, Jannaschia faecimaris Jung and Yoon 2014, Jannaschia sp. HD-22, KCTC 32179, strain HD-22
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.