STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDZ02543.1Putative spermidine/putrescine transport system permease protein. (282 aa)    
Predicted Functional Partners:
SDZ02517.1
Putative spermidine/putrescine transport system permease protein.
 
  0.996
SDZ02494.1
Putative spermidine/putrescine transport system substrate-binding protein.
 
 
 0.995
SDZ54556.1
Spermidine/putrescine transport system permease protein.
 
  0.989
SDZ38133.1
Spermidine/putrescine transport system permease protein.
 
  0.981
potA
Putative spermidine/putrescine transport system ATP-binding protein; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system.
 
  0.977
SDZ59348.1
Spermidine/putrescine transport system permease protein.
 
  0.953
SDZ54523.1
Spermidine/putrescine transport system substrate-binding protein.
 
 
  0.938
SDZ54539.1
Spermidine/putrescine transport system ATP-binding protein; Belongs to the ABC transporter superfamily.
 
  0.926
SDZ59374.1
Spermidine/putrescine transport system ATP-binding protein; Belongs to the ABC transporter superfamily.
 
  0.921
SDZ38098.1
Spermidine/putrescine transport system ATP-binding protein; Belongs to the ABC transporter superfamily.
 
  0.910
Your Current Organism:
Jannaschia faecimaris
NCBI taxonomy Id: 1244108
Other names: CCUG 63415, DSM 100420, J. faecimaris, Jannaschia faecimaris Jung and Yoon 2014, Jannaschia sp. HD-22, KCTC 32179, strain HD-22
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.