STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDZ20199.1Predicted dehydrogenase. (375 aa)    
Predicted Functional Partners:
SDZ20228.1
Sugar phosphate isomerase/epimerase.
 
 
  0.970
SDZ20258.1
Transcriptional regulator, LacI family.
 
    0.834
SDZ47420.1
2-keto-myo-inositol dehydratase.
 
  0.812
SDZ20363.1
Hypothetical protein.
 
     0.756
SDZ20395.1
Carbohydrate ABC transporter membrane protein 2, CUT1 family.
 
     0.745
SDZ20283.1
Dihydroxyacetone kinase.
  
    0.731
SDZ20312.1
Carbohydrate ABC transporter ATP-binding protein, CUT1 family; Belongs to the ABC transporter superfamily.
       0.712
SDZ20338.1
Carbohydrate ABC transporter ATP-binding protein, CUT1 family; Belongs to the ABC transporter superfamily.
       0.712
SDZ47453.1
3D-(3,5/4)-trihydroxycyclohexane-1,2-dione hydrolase; Belongs to the TPP enzyme family.
 
  
 0.708
SDZ47489.1
5-deoxyglucuronate isomerase.
 
  
 0.676
Your Current Organism:
Jannaschia faecimaris
NCBI taxonomy Id: 1244108
Other names: CCUG 63415, DSM 100420, J. faecimaris, Jannaschia faecimaris Jung and Yoon 2014, Jannaschia sp. HD-22, KCTC 32179, strain HD-22
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.