STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EME71747.1COG4942 Membrane-bound metallopeptidase. (477 aa)    
Predicted Functional Partners:
EME69221.1
COG2177 Cell division protein.
 
 
 
 0.967
EME71746.1
COG0793 Periplasmic protease; Belongs to the peptidase S41A family.
  
  
 0.920
EME71745.1
Skin secretory protein xP2 precursor; COG2861 Uncharacterized protein conserved in bacteria.
 
   
 0.868
EME70445.1
Zn-dependent protease with chaperone function; COG0265 Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain.
  
 
 0.837
rppH
NTP pyrophosphohydrolase including oxidative damage repair enzyme; Accelerates the degradation of transcripts by removing pyrophosphate from the 5'-end of triphosphorylated RNA, leading to a more labile monophosphorylated state that can stimulate subsequent ribonuclease cleavage; Belongs to the Nudix hydrolase family. RppH subfamily.
   
   0.830
EME71172.1
Methyltransferase; COG0457 FOG: TPR repeat.
  
 0.813
EME70709.1
Hypothetical protein; COG2201 Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain.
    
 0.802
EME71300.1
Fe-S oxidoreductase; COG0457 FOG: TPR repeat.
 
 
 
 0.747
EME70496.1
TPR repeat-containing protein; COG0457 FOG: TPR repeat.
   
 
 0.714
EME69797.1
SPY protein; COG0457 FOG: TPR repeat.
   
 
 0.706
Your Current Organism:
Magnetospirillum caucaseum
NCBI taxonomy Id: 1244869
Other names: DSM 28995, M. caucaseum, Magnetospirillum caucaseum Dziuba et al. 2016, Magnetospirillum sp. SO-1, VKM B-2936, strain SO-1
Server load: medium (62%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.